Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Stuberosum_PGSC0003DMG400044023 PGSC0003DMG400044023 |
chr10 | 5400798 | 5401145 | Phytozome | v3.4 | Solanum_tuberosum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Stuberosum_PGSC0003DMT400094452 PGSC0003DMT400094452 PAC:24413059 |
Low | No | 348 | Get ORF Coding potential... Type: noncoding Potential: -0.479 Folding energies... MFEI: -21.839 AMFE: -0.580 GC content %: 37.644 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Stuberosum_PGSC0003DMT400094452 | SwissProt | 2015-06-01 | Q43748 | 7.0e-9 |