Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Stuberosum_PGSC0003DMG401009459 PGSC0003DMG401009459 |
chr11 | 33764437 | 33765681 | Phytozome | v3.4 | Solanum_tuberosum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Stuberosum_PGSC0003DMT400024466 PGSC0003DMT400024466 PAC:24409945 |
Low | No | 606 | Get ORF Coding potential... Type: noncoding Potential: -0.144 Folding energies... MFEI: -23.201 AMFE: -0.654 GC content %: 35.479 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Stuberosum_PGSC0003DMT400024466 | SwissProt | 2015-06-01 | Q8RWQ4 | 6.0e-19 |