Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Stuberosum_PGSC0003DMG402013267 PGSC0003DMG402013267 |
chr11 | 2325882 | 2326477 | Phytozome | v3.4 | Solanum_tuberosum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Stuberosum_PGSC0003DMT400034520 PGSC0003DMT400034520 PAC:24407042 |
Low | No | 596 | Get ORF Coding potential... Type: noncoding Potential: -1.160 Folding energies... MFEI: -27.534 AMFE: -0.710 GC content %: 38.758 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Stuberosum_PGSC0003DMT400034520 | SwissProt | 2015-06-01 | Q2MHE4 | 3.0e-32 |