Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_1AL_0B4B6F75A Traes_1AL_0B4B6F75A |
ta_iwgsc_1al_v2_3917749 | 1693 | 4381 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_1AL_0B4B6F75A.1 Traes_1AL_0B4B6F75A.1 PAC:32015153 |
Low | No | 717 | Get ORF Coding potential... Type: noncoding Potential: -0.029 Folding energies... MFEI: -30.181 AMFE: -0.620 GC content %: 48.675 | |
Taestivum_Traes_1AL_0B4B6F75A.3 Traes_1AL_0B4B6F75A.3 PAC:32015154 |
Low | No | 899 | Get ORF Coding potential... Type: noncoding Potential: -0.253 Folding energies... MFEI: -26.707 AMFE: -0.562 GC content %: 47.497 |