Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_1AL_4B2CAEDE1 Traes_1AL_4B2CAEDE1 |
ta_iwgsc_1al_v2_328874 | 2605 | 3485 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_1AL_4B2CAEDE1.1 Traes_1AL_4B2CAEDE1.1 PAC:31979242 |
Low | No | 571 | Get ORF Coding potential... Type: noncoding Potential: -0.282 Folding energies... MFEI: -25.394 AMFE: -0.535 GC content %: 47.461 | |
Taestivum_Traes_1AL_4B2CAEDE1.2 Traes_1AL_4B2CAEDE1.2 PAC:31979241 |
Low | No | 574 | Get ORF Coding potential... Type: noncoding Potential: -0.266 Folding energies... MFEI: -26.150 AMFE: -0.550 GC content %: 47.561 |