Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_1AL_C0CC8DFEE Traes_1AL_C0CC8DFEE |
ta_iwgsc_1al_v2_1301662 | 29 | 495 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_1AL_C0CC8DFEE.2 Traes_1AL_C0CC8DFEE.2 PAC:31894775 |
High | No | 213 | Get ORF Coding potential... Type: noncoding Potential: -1.119 Folding energies... MFEI: -15.775 AMFE: -0.373 GC content %: 42.254 | |
Taestivum_Traes_1AL_C0CC8DFEE.3 Traes_1AL_C0CC8DFEE.3 PAC:31894777 |
High | No | 240 | Get ORF Coding potential... Type: noncoding Potential: -0.988 Folding energies... MFEI: -19.250 AMFE: -0.462 GC content %: 41.667 | |
Taestivum_Traes_1AL_C0CC8DFEE.4 Traes_1AL_C0CC8DFEE.4 PAC:31894776 |
High | No | 201 | Get ORF Coding potential... Type: noncoding Potential: -1.026 Folding energies... MFEI: -20.398 AMFE: -0.466 GC content %: 43.781 |