Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_1BL_A0A187E85 Traes_1BL_A0A187E85 |
ta_iwgsc_1bl_v1_3814066 | 4484 | 17482 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_1BL_A0A187E85.4 Traes_1BL_A0A187E85.4 PAC:31969905 |
Low | No | 817 | Get ORF Coding potential... Type: noncoding Potential: -1.022 Folding energies... MFEI: -36.291 AMFE: -0.690 GC content %: 52.632 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_1BL_A0A187E85.4 | RepBase (RepeatMasker) | 2014-01-31 | Gypsy-51_SB-I |