Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_1DL_5F8DC9726 Traes_1DL_5F8DC9726 |
ta_iwgsc_1dl_v1_2240334 | 708 | 1306 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_1DL_5F8DC9726.1 Traes_1DL_5F8DC9726.1 PAC:32027035 |
High | No | 401 | Get ORF Coding potential... Type: noncoding Potential: -0.651 Folding energies... MFEI: -32.195 AMFE: -0.564 GC content %: 57.107 | |
Taestivum_Traes_1DL_5F8DC9726.2 Traes_1DL_5F8DC9726.2 PAC:32027036 |
High | No | 259 | Get ORF Coding potential... Type: noncoding Potential: -0.893 Folding energies... MFEI: -35.019 AMFE: -0.589 GC content %: 59.459 |