Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_1DL_71433F43D Traes_1DL_71433F43D |
ta_iwgsc_1dl_v1_2291843 | 14137 | 14522 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_1DL_71433F43D.1 Traes_1DL_71433F43D.1 PAC:31823904 |
Low | No | 386 | Get ORF Coding potential... Type: noncoding Potential: -1.145 Folding energies... MFEI: -25.285 AMFE: -0.490 GC content %: 51.554 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_1DL_71433F43D.1 | RepBase (RepeatMasker) | 2014-01-31 | Copia-18_BD-I |