Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_2AS_B04B4A9C2 Traes_2AS_B04B4A9C2 |
ta_iwgsc_2as_v1_5270153 | 2467 | 5025 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_2AS_B04B4A9C2.1 Traes_2AS_B04B4A9C2.1 PAC:32022992 |
High | No | 321 | Get ORF Coding potential... Type: noncoding Potential: -0.101 Folding energies... MFEI: -35.607 AMFE: -0.586 GC content %: 60.748 | |
Taestivum_Traes_2AS_B04B4A9C2.4 Traes_2AS_B04B4A9C2.4 PAC:32022991 |
Low | No | 348 | Get ORF Coding potential... Type: coding Potential: 0.072 Folding energies... MFEI: -33.161 AMFE: -0.537 GC content %: 61.782 |