Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_2AS_CC5A4EE4C Traes_2AS_CC5A4EE4C |
ta_iwgsc_2as_v1_5276896 | 685 | 922 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_2AS_CC5A4EE4C.1 Traes_2AS_CC5A4EE4C.1 PAC:32026431 |
Low | No | 238 | Get ORF Coding potential... Type: noncoding Potential: -0.895 Folding energies... MFEI: -42.815 AMFE: -0.657 GC content %: 65.126 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_2AS_CC5A4EE4C.1 | RepBase (RepeatMasker) | 2014-01-31 | LINE1-41_ZM |