Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_2BL_1721D8372 Traes_2BL_1721D8372 |
ta_iwgsc_2bl_v1_8051011 | 1 | 204 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_2BL_1721D8372.1 Traes_2BL_1721D8372.1 PAC:31950208 |
Low | No | 204 | Get ORF Coding potential... Type: noncoding Potential: -0.083 Folding energies... MFEI: -14.559 AMFE: -0.401 GC content %: 36.275 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_2BL_1721D8372.1 | RepBase (RepeatMasker) | 2014-01-31 | EnSpm-1_STu |