Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_2BL_778FB7A6A Traes_2BL_778FB7A6A |
ta_iwgsc_2bl_v1_7947034 | 797 | 1435 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_2BL_778FB7A6A.1 Traes_2BL_778FB7A6A.1 PAC:31810998 |
Low | No | 639 | Get ORF Coding potential... Type: noncoding Potential: -0.948 Folding energies... MFEI: -38.560 AMFE: -0.706 GC content %: 54.617 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_2BL_778FB7A6A.1 | RepBase (RepeatMasker) | 2014-01-31 | RMU2A1C |