Gene

Taestivum Traes 2DL 01CACA64F

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Taestivum_Traes_2DL_01CACA64F
Traes_2DL_01CACA64F
ta_iwgsc_2dl_v1_9703234 1113 2142 Phytozome v2.2 Triticum_aestivum
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Taestivum_Traes_2DL_01CACA64F.1
Traes_2DL_01CACA64F.1
PAC:31938203
High No 731
Coding potential...
Type: noncoding Potential: -0.219
Folding energies...
MFEI: -29.918 AMFE: -0.606
GC content
%: 49.384
Taestivum_Traes_2DL_01CACA64F.2
Traes_2DL_01CACA64F.2
PAC:31938204
High No 695
Coding potential...
Type: noncoding Potential: -0.591
Folding energies...
MFEI: -29.151 AMFE: -0.587
GC content
%: 49.640


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Traes_2DL_01CACA64F.png