Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_2DL_4985D3FE0 Traes_2DL_4985D3FE0 |
ta_iwgsc_2dl_v1_9906939 | 8255 | 11429 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_2DL_4985D3FE0.2 Traes_2DL_4985D3FE0.2 PAC:31788800 |
High | No | 568 | Get ORF Coding potential... Type: noncoding Potential: -0.752 Folding energies... MFEI: -36.180 AMFE: -0.579 GC content %: 62.500 | |
Taestivum_Traes_2DL_4985D3FE0.3 Traes_2DL_4985D3FE0.3 PAC:31788801 |
High | No | 809 | Get ORF Coding potential... Type: noncoding Potential: -0.867 Folding energies... MFEI: -31.273 AMFE: -0.511 GC content %: 61.187 |