Gene

Taestivum Traes 2DL A8E86AEE7

From GreeNC


Gene information
Help.png

This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Taestivum_Traes_2DL_A8E86AEE7
Traes_2DL_A8E86AEE7
ta_iwgsc_2dl_v1_498325 3 226 Phytozome v2.2 Triticum_aestivum
Coding?
No


Transcript features
Help.png

This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Taestivum_Traes_2DL_A8E86AEE7.1
Traes_2DL_A8E86AEE7.1
PAC:31735785
High No 224
Coding potential...
Type: noncoding Potential: -1.051
Folding energies...
MFEI: -44.866 AMFE: -0.613
GC content
%: 73.214


Gene models
Help.png

Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

Traes_2DL_A8E86AEE7.png