Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_2DL_D6DA83D5B Traes_2DL_D6DA83D5B |
ta_iwgsc_2dl_v1_9908127 | 833 | 6599 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_2DL_D6DA83D5B.4 Traes_2DL_D6DA83D5B.4 PAC:31791441 |
High | No | 538 | Get ORF Coding potential... Type: noncoding Potential: -0.026 Folding energies... MFEI: -29.554 AMFE: -0.671 GC content %: 44.052 | |
Taestivum_Traes_2DL_D6DA83D5B.5 Traes_2DL_D6DA83D5B.5 PAC:31791443 |
High | No | 903 | Get ORF Coding potential... Type: noncoding Potential: -0.087 Folding energies... MFEI: -28.350 AMFE: -0.703 GC content %: 40.310 | |
Taestivum_Traes_2DL_D6DA83D5B.6 Traes_2DL_D6DA83D5B.6 PAC:31791444 |
High | No | 253 | Get ORF Coding potential... Type: noncoding Potential: -0.640 Folding energies... MFEI: -25.573 AMFE: -0.563 GC content %: 45.455 | |
Taestivum_Traes_2DL_D6DA83D5B.7 Traes_2DL_D6DA83D5B.7 PAC:31791442 |
High | No | 406 | Get ORF Coding potential... Type: noncoding Potential: -0.961 Folding energies... MFEI: -27.709 AMFE: -0.602 GC content %: 46.059 |