Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_2DL_F0ECE0B24 Traes_2DL_F0ECE0B24 |
ta_iwgsc_2dl_v1_558923 | 1 | 203 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_2DL_F0ECE0B24.1 Traes_2DL_F0ECE0B24.1 PAC:31938832 |
Low | No | 203 | Get ORF Coding potential... Type: noncoding Potential: -0.861 Folding energies... MFEI: -14.089 AMFE: -0.349 GC content %: 40.394 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_2DL_F0ECE0B24.1 | RepBase (RepeatMasker) | 2014-01-31 | HELITRON4_OS |