Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_2DS_01B39C512 Traes_2DS_01B39C512 |
ta_iwgsc_2ds_v1_5336486 | 1 | 201 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_2DS_01B39C512.1 Traes_2DS_01B39C512.1 PAC:31790259 |
Low | No | 201 | Get ORF Coding potential... Type: noncoding Potential: -1.169 Folding energies... MFEI: -25.025 AMFE: -0.535 GC content %: 46.766 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_2DS_01B39C512.1 | RepBase (RepeatMasker) | 2014-01-31 | Athila4_I-int |