Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_3AL_653328E24 Traes_3AL_653328E24 |
ta_iwgsc_3al_v1_4364569 | 1877 | 2140 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_3AL_653328E24.1 Traes_3AL_653328E24.1 PAC:31815738 |
Low | No | 264 | Get ORF Coding potential... Type: noncoding Potential: -1.025 Folding energies... MFEI: -22.955 AMFE: -0.518 GC content %: 44.318 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_3AL_653328E24.1 | RepBase (RepeatMasker) | 2014-01-31 | Helitron-2_SBi |