Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_3AS_653ADE375 Traes_3AS_653ADE375 |
ta_iwgsc_3as_v1_3380561 | 626 | 1544 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_3AS_653ADE375.1 Traes_3AS_653ADE375.1 PAC:31936842 |
Low | No | 590 | Get ORF Coding potential... Type: noncoding Potential: -0.964 Folding energies... MFEI: -31.153 AMFE: -0.686 GC content %: 45.424 | |
Taestivum_Traes_3AS_653ADE375.2 Traes_3AS_653ADE375.2 PAC:31936843 |
High | No | 882 | Get ORF Coding potential... Type: noncoding Potential: -1.051 Folding energies... MFEI: -28.254 AMFE: -0.663 GC content %: 42.630 |