Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_3AS_9FAAC4773 Traes_3AS_9FAAC4773 |
ta_iwgsc_3as_v1_3442337 | 1383 | 3983 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_3AS_9FAAC4773.1 Traes_3AS_9FAAC4773.1 PAC:31833511 |
Low | No | 940 | Get ORF Coding potential... Type: noncoding Potential: -0.621 Folding energies... MFEI: -31.160 AMFE: -0.657 GC content %: 47.447 | |
Taestivum_Traes_3AS_9FAAC4773.2 Traes_3AS_9FAAC4773.2 PAC:31833512 |
Low | No | 1059 | Get ORF Coding potential... Type: noncoding Potential: -0.651 Folding energies... MFEI: -30.425 AMFE: -0.683 GC content %: 44.570 |