Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_3B_3D0B9BD4E Traes_3B_3D0B9BD4E |
ta_iwgsc_3b_v1_10534671 | 421 | 1667 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_3B_3D0B9BD4E.1 Traes_3B_3D0B9BD4E.1 PAC:31874695 |
High | No | 686 | Get ORF Coding potential... Type: noncoding Potential: -0.837 Folding energies... MFEI: -27.536 AMFE: -0.649 GC content %: 42.420 | |
Taestivum_Traes_3B_3D0B9BD4E.3 Traes_3B_3D0B9BD4E.3 PAC:31874697 |
High | No | 563 | Get ORF Coding potential... Type: noncoding Potential: -1.126 Folding energies... MFEI: -26.767 AMFE: -0.661 GC content %: 40.497 | |
Taestivum_Traes_3B_3D0B9BD4E.4 Traes_3B_3D0B9BD4E.4 PAC:31874696 |
High | No | 590 | Get ORF Coding potential... Type: noncoding Potential: -1.135 Folding energies... MFEI: -27.322 AMFE: -0.661 GC content %: 41.356 |