Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_3B_52653C0EF Traes_3B_52653C0EF |
ta_iwgsc_3b_v1_10571937 | 11513 | 13429 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_3B_52653C0EF.4 Traes_3B_52653C0EF.4 PAC:31967248 |
High | No | 868 | Get ORF Coding potential... Type: noncoding Potential: -0.375 Folding energies... MFEI: -27.938 AMFE: -0.645 GC content %: 43.318 | |
Taestivum_Traes_3B_52653C0EF.5 Traes_3B_52653C0EF.5 PAC:31967249 |
High | No | 1038 | Get ORF Coding potential... Type: noncoding Potential: -0.640 Folding energies... MFEI: -26.859 AMFE: -0.631 GC content %: 42.582 |