Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_3B_75A47986B Traes_3B_75A47986B |
ta_iwgsc_3b_v1_10757434 | 11572 | 15194 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_3B_75A47986B.5 Traes_3B_75A47986B.5 PAC:31762058 |
Low | No | 1028 | Get ORF Coding potential... Type: noncoding Potential: -0.732 Folding energies... MFEI: -27.111 AMFE: -0.628 GC content %: 43.191 | |
Taestivum_Traes_3B_75A47986B.6 Traes_3B_75A47986B.6 PAC:31762057 |
Low | No | 1145 | Get ORF Coding potential... Type: noncoding Potential: -0.035 Folding energies... MFEI: -28.943 AMFE: -0.642 GC content %: 45.066 |