Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_3B_9CE87A03F Traes_3B_9CE87A03F |
ta_iwgsc_3b_v1_10556376 | 1951 | 6468 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_3B_9CE87A03F.1 Traes_3B_9CE87A03F.1 PAC:31958711 |
High | No | 258 | Get ORF Coding potential... Type: noncoding Potential: -0.924 Folding energies... MFEI: -28.178 AMFE: -0.591 GC content %: 47.674 | |
Taestivum_Traes_3B_9CE87A03F.2 Traes_3B_9CE87A03F.2 PAC:31958712 |
High | No | 319 | Get ORF Coding potential... Type: noncoding Potential: -0.998 Folding energies... MFEI: -28.683 AMFE: -0.658 GC content %: 43.574 | |
Taestivum_Traes_3B_9CE87A03F.3 Traes_3B_9CE87A03F.3 PAC:31958713 |
High | No | 870 | Get ORF Coding potential... Type: noncoding Potential: -1.208 Folding energies... MFEI: -28.000 AMFE: -0.671 GC content %: 41.724 |