Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_3B_9D42C12D8 Traes_3B_9D42C12D8 |
ta_iwgsc_3b_v1_10633388 | 2390 | 6745 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_3B_9D42C12D8.7 Traes_3B_9D42C12D8.7 PAC:31874743 |
Low | Yes | 715 | Get ORF Coding potential... Type: noncoding Potential: -1.431 Folding energies... MFEI: -27.972 AMFE: -0.602 GC content %: 46.434 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_3B_9D42C12D8.7 | Rfam | 11.0 | MIR1122 | 3.2e-5 |