Gene

Taestivum Traes 3B C4B004A4E

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Taestivum_Traes_3B_C4B004A4E
Traes_3B_C4B004A4E
ta_iwgsc_3b_v1_10703428 999 1430 Phytozome v2.2 Triticum_aestivum
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Taestivum_Traes_3B_C4B004A4E.1
Traes_3B_C4B004A4E.1
PAC:31873375
High No 327
Coding potential...
Type: noncoding Potential: -1.186
Folding energies...
MFEI: -36.052 AMFE: -0.564
GC content
%: 63.914


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

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