Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_3DL_235940A0D Traes_3DL_235940A0D |
ta_iwgsc_3dl_v1_6952249 | 2334 | 2618 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_3DL_235940A0D.1 Traes_3DL_235940A0D.1 PAC:31872448 |
Low | No | 285 | Get ORF Coding potential... Type: noncoding Potential: -0.438 Folding energies... MFEI: -20.912 AMFE: -0.542 GC content %: 38.596 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_3DL_235940A0D.1 | RepBase (RepeatMasker) | 2014-01-31 | hAT-6_SBi |