Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_3DL_579EB20AF Traes_3DL_579EB20AF |
ta_iwgsc_3dl_v1_1643214 | 19 | 1055 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_3DL_579EB20AF.1 Traes_3DL_579EB20AF.1 PAC:31918754 |
High | No | 597 | Get ORF Coding potential... Type: noncoding Potential: -1.117 Folding energies... MFEI: -29.832 AMFE: -0.641 GC content %: 46.566 | |
Taestivum_Traes_3DL_579EB20AF.2 Traes_3DL_579EB20AF.2 PAC:31918753 |
High | No | 596 | Get ORF Coding potential... Type: noncoding Potential: -0.961 Folding energies... MFEI: -28.859 AMFE: -0.628 GC content %: 45.973 |