Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_3DL_E5ABC5B23 Traes_3DL_E5ABC5B23 |
ta_iwgsc_3dl_v1_6860812 | 4 | 297 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_3DL_E5ABC5B23.1 Traes_3DL_E5ABC5B23.1 PAC:31920709 |
Low | No | 294 | Get ORF Coding potential... Type: noncoding Potential: -0.967 Folding energies... MFEI: -28.980 AMFE: -0.666 GC content %: 43.537 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_3DL_E5ABC5B23.1 | RepBase (RepeatMasker) | 2014-01-31 | LINE1-34_SBi |