Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_3DS_3BB012DAA Traes_3DS_3BB012DAA |
ta_iwgsc_3ds_v1_2603365 | 3 | 2502 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_3DS_3BB012DAA.2 Traes_3DS_3BB012DAA.2 PAC:31851185 |
High | No | 1080 | Get ORF Coding potential... Type: noncoding Potential: -1.070 Folding energies... MFEI: -25.185 AMFE: -0.662 GC content %: 38.056 | |
Taestivum_Traes_3DS_3BB012DAA.3 Traes_3DS_3BB012DAA.3 PAC:31851187 |
Low | No | 879 | Get ORF Coding potential... Type: noncoding Potential: -1.336 Folding energies... MFEI: -25.984 AMFE: -0.634 GC content %: 40.956 |