Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_3DS_553CE7AD1 Traes_3DS_553CE7AD1 |
ta_iwgsc_3ds_v1_2554950 | 4 | 1645 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_3DS_553CE7AD1.3 Traes_3DS_553CE7AD1.3 PAC:31861075 |
Low | No | 527 | Get ORF Coding potential... Type: noncoding Potential: -1.079 Folding energies... MFEI: -26.698 AMFE: -0.586 GC content %: 45.541 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_3DS_553CE7AD1.3 | RepBase (RepeatMasker) | 2014-01-31 | DEIMOS_TM |