Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_3DS_635A4DE04 Traes_3DS_635A4DE04 |
ta_iwgsc_3ds_v1_2595436 | 586 | 1331 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_3DS_635A4DE04.1 Traes_3DS_635A4DE04.1 PAC:31867296 |
High | No | 657 | Get ORF Coding potential... Type: noncoding Potential: -0.913 Folding energies... MFEI: -25.160 AMFE: -0.504 GC content %: 49.924 | |
Taestivum_Traes_3DS_635A4DE04.2 Traes_3DS_635A4DE04.2 PAC:31867297 |
High | No | 638 | Get ORF Coding potential... Type: noncoding Potential: -1.014 Folding energies... MFEI: -28.135 AMFE: -0.547 GC content %: 51.411 | |
Taestivum_Traes_3DS_635A4DE04.3 Traes_3DS_635A4DE04.3 PAC:31867298 |
High | No | 582 | Get ORF Coding potential... Type: noncoding Potential: -0.969 Folding energies... MFEI: -25.876 AMFE: -0.497 GC content %: 52.062 |