Gene

Taestivum Traes 3DS BB6F8DE56

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Taestivum_Traes_3DS_BB6F8DE56
Traes_3DS_BB6F8DE56
ta_iwgsc_3ds_v1_2602372 1 391 Phytozome v2.2 Triticum_aestivum
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Taestivum_Traes_3DS_BB6F8DE56.1
Traes_3DS_BB6F8DE56.1
PAC:31766499
High No 391
Coding potential...
Type: noncoding Potential: -0.493
Folding energies...
MFEI: -34.297 AMFE: -0.596
GC content
%: 57.545


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

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