Gene

Taestivum Traes 3DS D232D9685

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Taestivum_Traes_3DS_D232D9685
Traes_3DS_D232D9685
ta_iwgsc_3ds_v1_2575694 1695 2138 Phytozome v2.2 Triticum_aestivum
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Taestivum_Traes_3DS_D232D9685.1
Traes_3DS_D232D9685.1
PAC:32009445
Low No 444
Coding potential...
Type: noncoding Potential: -0.897
Folding energies...
MFEI: -32.815 AMFE: -0.631
GC content
%: 52.027


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

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