Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_4AL_66C48CC28 Traes_4AL_66C48CC28 |
ta_iwgsc_4al_v2_7171698 | 12 | 3494 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_4AL_66C48CC28.12 Traes_4AL_66C48CC28.12 PAC:31916387 |
Low | No | 613 | Get ORF Coding potential... Type: noncoding Potential: -1.020 Folding energies... MFEI: -25.840 AMFE: -0.612 GC content %: 42.251 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_4AL_66C48CC28.12 | RepBase (RepeatMasker) | 2014-01-31 | HELMET4 |