Gene
Taestivum Traes 4AL 8CEBC2DCF
From GreeNC
Gene information
This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.
| Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
|---|---|---|---|---|---|---|---|
| Taestivum_Traes_4AL_8CEBC2DCF Traes_4AL_8CEBC2DCF |
ta_iwgsc_4al_v2_7165695 | 22 | 8978 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
Transcript features
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
| Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
|---|---|---|---|---|---|
| Taestivum_Traes_4AL_8CEBC2DCF.13 Traes_4AL_8CEBC2DCF.13 PAC:31873248 |
Low | No | 3931 | Get ORF Coding potential... Type: noncoding Potential: -0.210 Folding energies... MFEI: -31.134 AMFE: -0.641 GC content %: 48.537 | |
| Taestivum_Traes_4AL_8CEBC2DCF.14 Traes_4AL_8CEBC2DCF.14 PAC:31873249 |
Low | No | 4088 | Get ORF Coding potential... Type: noncoding Potential: -0.217 Folding energies... MFEI: -30.405 AMFE: -0.642 GC content %: 47.358 | |
| Taestivum_Traes_4AL_8CEBC2DCF.15 Traes_4AL_8CEBC2DCF.15 PAC:31873250 |
Low | No | 4024 | Get ORF Coding potential... Type: noncoding Potential: -0.216 Folding energies... MFEI: -30.773 AMFE: -0.652 GC content %: 47.167 | |
| Taestivum_Traes_4AL_8CEBC2DCF.16 Traes_4AL_8CEBC2DCF.16 PAC:31873251 |
Low | No | 3842 | Get ORF Coding potential... Type: noncoding Potential: -0.257 Folding energies... MFEI: -31.655 AMFE: -0.654 GC content %: 48.438 | |
| Taestivum_Traes_4AL_8CEBC2DCF.17 Traes_4AL_8CEBC2DCF.17 PAC:31873253 |
Low | No | 3423 | Get ORF Coding potential... Type: noncoding Potential: -0.224 Folding energies... MFEI: -31.852 AMFE: -0.642 GC content %: 49.576 | |
| Taestivum_Traes_4AL_8CEBC2DCF.18 Traes_4AL_8CEBC2DCF.18 PAC:31873252 |
Low | No | 3643 | Get ORF Coding potential... Type: noncoding Potential: -0.204 Folding energies... MFEI: -31.548 AMFE: -0.646 GC content %: 48.861 | |
| Taestivum_Traes_4AL_8CEBC2DCF.21 Traes_4AL_8CEBC2DCF.21 PAC:31873257 |
Low | No | 4033 | Get ORF Coding potential... Type: noncoding Potential: -0.216 Folding energies... MFEI: -30.498 AMFE: -0.643 GC content %: 47.458 | |
| Taestivum_Traes_4AL_8CEBC2DCF.22 Traes_4AL_8CEBC2DCF.22 PAC:31873256 |
Low | No | 3787 | Get ORF Coding potential... Type: noncoding Potential: -0.207 Folding energies... MFEI: -31.404 AMFE: -0.648 GC content %: 48.482 | |
| Taestivum_Traes_4AL_8CEBC2DCF.23 Traes_4AL_8CEBC2DCF.23 PAC:31873258 |
Low | No | 3677 | Get ORF Coding potential... Type: noncoding Potential: -0.204 Folding energies... MFEI: -31.221 AMFE: -0.641 GC content %: 48.681 | |
| Taestivum_Traes_4AL_8CEBC2DCF.24 Traes_4AL_8CEBC2DCF.24 PAC:31873259 |
Low | No | 3605 | Get ORF Coding potential... Type: noncoding Potential: -0.202 Folding energies... MFEI: -31.495 AMFE: -0.644 GC content %: 48.877 | |
| Taestivum_Traes_4AL_8CEBC2DCF.25 Traes_4AL_8CEBC2DCF.25 PAC:31873260 |
Low | No | 3455 | Get ORF Coding potential... Type: noncoding Potential: -0.196 Folding energies... MFEI: -31.867 AMFE: -0.643 GC content %: 49.522 | |
| Taestivum_Traes_4AL_8CEBC2DCF.26 Traes_4AL_8CEBC2DCF.26 PAC:31873262 |
Low | No | 3855 | Get ORF Coding potential... Type: noncoding Potential: -0.170 Folding energies... MFEI: -30.934 AMFE: -0.656 GC content %: 47.134 | |
| Taestivum_Traes_4AL_8CEBC2DCF.27 Traes_4AL_8CEBC2DCF.27 PAC:31873261 |
Low | No | 3590 | Get ORF Coding potential... Type: noncoding Potential: -0.172 Folding energies... MFEI: -31.713 AMFE: -0.646 GC content %: 49.081 | |
| Taestivum_Traes_4AL_8CEBC2DCF.28 Traes_4AL_8CEBC2DCF.28 PAC:31873263 |
Low | No | 3230 | Get ORF Coding potential... Type: noncoding Potential: -0.188 Folding energies... MFEI: -30.728 AMFE: -0.629 GC content %: 48.824 | |
| Taestivum_Traes_4AL_8CEBC2DCF.29 Traes_4AL_8CEBC2DCF.29 PAC:31873264 |
Low | No | 3484 | Get ORF Coding potential... Type: noncoding Potential: -0.368 Folding energies... MFEI: -30.657 AMFE: -0.677 GC content %: 45.264 | |
| Taestivum_Traes_4AL_8CEBC2DCF.30 Traes_4AL_8CEBC2DCF.30 PAC:31873286 |
Low | No | 3663 | Get ORF Coding potential... Type: noncoding Potential: -0.204 Folding energies... MFEI: -31.600 AMFE: -0.647 GC content %: 48.867 | |
| Taestivum_Traes_4AL_8CEBC2DCF.31 Traes_4AL_8CEBC2DCF.31 PAC:31873278 |
Low | No | 3871 | Get ORF Coding potential... Type: noncoding Potential: -0.208 Folding energies... MFEI: -31.410 AMFE: -0.642 GC content %: 48.902 | |
| Taestivum_Traes_4AL_8CEBC2DCF.32 Traes_4AL_8CEBC2DCF.32 PAC:31873272 |
Low | No | 3638 | Get ORF Coding potential... Type: noncoding Potential: -0.204 Folding energies... MFEI: -31.564 AMFE: -0.646 GC content %: 48.873 | |
| Taestivum_Traes_4AL_8CEBC2DCF.33 Traes_4AL_8CEBC2DCF.33 PAC:31873279 |
Low | No | 3567 | Get ORF Coding potential... Type: noncoding Potential: -0.202 Folding energies... MFEI: -31.603 AMFE: -0.648 GC content %: 48.780 | |
| Taestivum_Traes_4AL_8CEBC2DCF.34 Traes_4AL_8CEBC2DCF.34 PAC:31873267 |
Low | No | 3683 | Get ORF Coding potential... Type: noncoding Potential: -0.205 Folding energies... MFEI: -31.313 AMFE: -0.642 GC content %: 48.737 | |
| Taestivum_Traes_4AL_8CEBC2DCF.35 Traes_4AL_8CEBC2DCF.35 PAC:31873268 |
Low | No | 3941 | Get ORF Coding potential... Type: noncoding Potential: -0.244 Folding energies... MFEI: -30.811 AMFE: -0.636 GC content %: 48.465 | |
| Taestivum_Traes_4AL_8CEBC2DCF.36 Traes_4AL_8CEBC2DCF.36 PAC:31873269 |
Low | No | 3470 | Get ORF Coding potential... Type: noncoding Potential: -0.226 Folding energies... MFEI: -31.524 AMFE: -0.639 GC content %: 49.366 | |
| Taestivum_Traes_4AL_8CEBC2DCF.37 Traes_4AL_8CEBC2DCF.37 PAC:31873266 |
Low | No | 3961 | Get ORF Coding potential... Type: noncoding Potential: -0.215 Folding energies... MFEI: -30.916 AMFE: -0.641 GC content %: 48.195 | |
| Taestivum_Traes_4AL_8CEBC2DCF.39 Traes_4AL_8CEBC2DCF.39 PAC:31873270 |
Low | No | 3617 | Get ORF Coding potential... Type: noncoding Potential: -0.203 Folding energies... MFEI: -31.532 AMFE: -0.644 GC content %: 48.963 | |
| Taestivum_Traes_4AL_8CEBC2DCF.40 Traes_4AL_8CEBC2DCF.40 PAC:31873282 |
Low | No | 3537 | Get ORF Coding potential... Type: noncoding Potential: -0.187 Folding energies... MFEI: -31.563 AMFE: -0.643 GC content %: 49.081 | |
| Taestivum_Traes_4AL_8CEBC2DCF.41 Traes_4AL_8CEBC2DCF.41 PAC:31873284 |
Low | No | 3876 | Get ORF Coding potential... Type: noncoding Potential: -0.194 Folding energies... MFEI: -31.289 AMFE: -0.649 GC content %: 48.194 | |
| Taestivum_Traes_4AL_8CEBC2DCF.42 Traes_4AL_8CEBC2DCF.42 PAC:31873276 |
Low | No | 3582 | Get ORF Coding potential... Type: noncoding Potential: -0.226 Folding energies... MFEI: -31.862 AMFE: -0.648 GC content %: 49.162 | |
| Taestivum_Traes_4AL_8CEBC2DCF.43 Traes_4AL_8CEBC2DCF.43 PAC:31873271 |
Low | No | 3748 | Get ORF Coding potential... Type: noncoding Potential: -0.231 Folding energies... MFEI: -31.646 AMFE: -0.651 GC content %: 48.613 | |
| Taestivum_Traes_4AL_8CEBC2DCF.44 Traes_4AL_8CEBC2DCF.44 PAC:31873283 |
Low | No | 3223 | Get ORF Coding potential... Type: noncoding Potential: -0.188 Folding energies... MFEI: -31.753 AMFE: -0.655 GC content %: 48.464 | |
| Taestivum_Traes_4AL_8CEBC2DCF.45 Traes_4AL_8CEBC2DCF.45 PAC:31873280 |
Low | No | 3579 | Get ORF Coding potential... Type: noncoding Potential: -0.202 Folding energies... MFEI: -31.576 AMFE: -0.648 GC content %: 48.757 | |
| Taestivum_Traes_4AL_8CEBC2DCF.46 Traes_4AL_8CEBC2DCF.46 PAC:31873274 |
Low | No | 3954 | Get ORF Coding potential... Type: noncoding Potential: -0.181 Folding energies... MFEI: -31.099 AMFE: -0.647 GC content %: 48.078 | |
| Taestivum_Traes_4AL_8CEBC2DCF.47 Traes_4AL_8CEBC2DCF.47 PAC:31873273 |
Low | No | 3369 | Get ORF Coding potential... Type: noncoding Potential: -0.195 Folding energies... MFEI: -31.541 AMFE: -0.638 GC content %: 49.421 | |
| Taestivum_Traes_4AL_8CEBC2DCF.48 Traes_4AL_8CEBC2DCF.48 PAC:31873277 |
Low | No | 3725 | Get ORF Coding potential... Type: noncoding Potential: -0.206 Folding energies... MFEI: -31.305 AMFE: -0.642 GC content %: 48.725 | |
| Taestivum_Traes_4AL_8CEBC2DCF.49 Traes_4AL_8CEBC2DCF.49 PAC:31873281 |
Low | No | 3438 | Get ORF Coding potential... Type: noncoding Potential: -0.196 Folding energies... MFEI: -31.955 AMFE: -0.654 GC content %: 48.837 | |
| Taestivum_Traes_4AL_8CEBC2DCF.50 Traes_4AL_8CEBC2DCF.50 PAC:31873275 |
Low | No | 3640 | Get ORF Coding potential... Type: noncoding Potential: -0.173 Folding energies... MFEI: -31.379 AMFE: -0.663 GC content %: 47.363 | |
| Taestivum_Traes_4AL_8CEBC2DCF.51 Traes_4AL_8CEBC2DCF.51 PAC:31873285 |
Low | No | 2886 | Get ORF Coding potential... Type: noncoding Potential: -0.331 Folding energies... MFEI: -31.029 AMFE: -0.680 GC content %: 45.599 | |
| Taestivum_Traes_4AL_8CEBC2DCF.52 Traes_4AL_8CEBC2DCF.52 PAC:31873287 |
Low | No | 3049 | Get ORF Coding potential... Type: noncoding Potential: -0.901 Folding energies... MFEI: -31.832 AMFE: -0.634 GC content %: 50.213 | |
| Taestivum_Traes_4AL_8CEBC2DCF.53 Traes_4AL_8CEBC2DCF.53 PAC:31873303 |
Low | No | 3927 | Get ORF Coding potential... Type: noncoding Potential: -0.210 Folding energies... MFEI: -30.715 AMFE: -0.644 GC content %: 47.721 | |
| Taestivum_Traes_4AL_8CEBC2DCF.54 Traes_4AL_8CEBC2DCF.54 PAC:31873297 |
Low | No | 3320 | Get ORF Coding potential... Type: noncoding Potential: -0.218 Folding energies... MFEI: -30.654 AMFE: -0.624 GC content %: 49.096 | |
| Taestivum_Traes_4AL_8CEBC2DCF.55 Traes_4AL_8CEBC2DCF.55 PAC:31873305 |
Low | No | 4112 | Get ORF Coding potential... Type: noncoding Potential: -0.217 Folding energies... MFEI: -30.904 AMFE: -0.645 GC content %: 47.933 | |
| Taestivum_Traes_4AL_8CEBC2DCF.56 Traes_4AL_8CEBC2DCF.56 PAC:31873299 |
Low | No | 3985 | Get ORF Coding potential... Type: noncoding Potential: -0.215 Folding energies... MFEI: -30.694 AMFE: -0.649 GC content %: 47.302 | |
| Taestivum_Traes_4AL_8CEBC2DCF.57 Traes_4AL_8CEBC2DCF.57 PAC:31873301 |
Low | No | 3819 | Get ORF Coding potential... Type: noncoding Potential: -0.207 Folding energies... MFEI: -30.958 AMFE: -0.642 GC content %: 48.259 | |
| Taestivum_Traes_4AL_8CEBC2DCF.58 Traes_4AL_8CEBC2DCF.58 PAC:31873302 |
Low | No | 4306 | Get ORF Coding potential... Type: noncoding Potential: -0.221 Folding energies... MFEI: -30.503 AMFE: -0.650 GC content %: 46.958 | |
| Taestivum_Traes_4AL_8CEBC2DCF.60 Traes_4AL_8CEBC2DCF.60 PAC:31873300 |
Low | No | 3635 | Get ORF Coding potential... Type: noncoding Potential: -0.204 Folding energies... MFEI: -31.370 AMFE: -0.647 GC content %: 48.473 | |
| Taestivum_Traes_4AL_8CEBC2DCF.61 Traes_4AL_8CEBC2DCF.61 PAC:31873306 |
Low | No | 3741 | Get ORF Coding potential... Type: noncoding Potential: -0.206 Folding energies... MFEI: -31.077 AMFE: -0.641 GC content %: 48.463 | |
| Taestivum_Traes_4AL_8CEBC2DCF.62 Traes_4AL_8CEBC2DCF.62 PAC:31873290 |
Low | No | 3319 | Get ORF Coding potential... Type: noncoding Potential: -0.190 Folding energies... MFEI: -31.067 AMFE: -0.651 GC content %: 47.755 | |
| Taestivum_Traes_4AL_8CEBC2DCF.63 Traes_4AL_8CEBC2DCF.63 PAC:31873292 |
Low | No | 3942 | Get ORF Coding potential... Type: noncoding Potential: -0.196 Folding energies... MFEI: -30.469 AMFE: -0.641 GC content %: 47.514 | |
| Taestivum_Traes_4AL_8CEBC2DCF.64 Traes_4AL_8CEBC2DCF.64 PAC:31873307 |
Low | No | 3877 | Get ORF Coding potential... Type: noncoding Potential: -0.194 Folding energies... MFEI: -30.717 AMFE: -0.648 GC content %: 47.382 | |
| Taestivum_Traes_4AL_8CEBC2DCF.65 Traes_4AL_8CEBC2DCF.65 PAC:31873289 |
Low | No | 4410 | Get ORF Coding potential... Type: noncoding Potential: -0.208 Folding energies... MFEI: -30.308 AMFE: -0.646 GC content %: 46.893 | |
| Taestivum_Traes_4AL_8CEBC2DCF.66 Traes_4AL_8CEBC2DCF.66 PAC:31873296 |
Low | No | 3714 | Get ORF Coding potential... Type: noncoding Potential: -0.205 Folding energies... MFEI: -31.432 AMFE: -0.648 GC content %: 48.519 | |
| Taestivum_Traes_4AL_8CEBC2DCF.67 Traes_4AL_8CEBC2DCF.67 PAC:31873295 |
Low | No | 3875 | Get ORF Coding potential... Type: noncoding Potential: -0.233 Folding energies... MFEI: -31.228 AMFE: -0.649 GC content %: 48.129 | |
| Taestivum_Traes_4AL_8CEBC2DCF.68 Traes_4AL_8CEBC2DCF.68 PAC:31873298 |
Low | No | 3733 | Get ORF Coding potential... Type: noncoding Potential: -0.230 Folding energies... MFEI: -31.267 AMFE: -0.645 GC content %: 48.460 | |
| Taestivum_Traes_4AL_8CEBC2DCF.69 Traes_4AL_8CEBC2DCF.69 PAC:31873294 |
Low | No | 3761 | Get ORF Coding potential... Type: noncoding Potential: -0.174 Folding energies... MFEI: -31.040 AMFE: -0.653 GC content %: 47.541 | |
| Taestivum_Traes_4AL_8CEBC2DCF.70 Traes_4AL_8CEBC2DCF.70 PAC:31873291 |
Low | No | 3633 | Get ORF Coding potential... Type: noncoding Potential: -0.173 Folding energies... MFEI: -31.459 AMFE: -0.647 GC content %: 48.610 | |
| Taestivum_Traes_4AL_8CEBC2DCF.71 Traes_4AL_8CEBC2DCF.71 PAC:31873304 |
Low | No | 4080 | Get ORF Coding potential... Type: noncoding Potential: -0.217 Folding energies... MFEI: -30.355 AMFE: -0.642 GC content %: 47.304 | |
| Taestivum_Traes_4AL_8CEBC2DCF.72 Traes_4AL_8CEBC2DCF.72 PAC:31873288 |
Low | No | 3675 | Get ORF Coding potential... Type: noncoding Potential: -0.204 Folding energies... MFEI: -30.581 AMFE: -0.631 GC content %: 48.463 | |
| Taestivum_Traes_4AL_8CEBC2DCF.73 Traes_4AL_8CEBC2DCF.73 PAC:31873308 |
Low | No | 3204 | Get ORF Coding potential... Type: noncoding Potential: -0.318 Folding energies... MFEI: -31.713 AMFE: -0.639 GC content %: 49.594 | |
| Taestivum_Traes_4AL_8CEBC2DCF.74 Traes_4AL_8CEBC2DCF.74 PAC:31873311 |
Low | No | 3876 | Get ORF Coding potential... Type: noncoding Potential: -0.176 Folding energies... MFEI: -30.911 AMFE: -0.656 GC content %: 47.085 | |
| Taestivum_Traes_4AL_8CEBC2DCF.75 Traes_4AL_8CEBC2DCF.75 PAC:31873309 |
Low | No | 3551 | Get ORF Coding potential... Type: noncoding Potential: -1.108 Folding energies... MFEI: -31.402 AMFE: -0.658 GC content %: 47.733 | |
| Taestivum_Traes_4AL_8CEBC2DCF.76 Traes_4AL_8CEBC2DCF.76 PAC:31873310 |
Low | No | 3782 | Get ORF Coding potential... Type: noncoding Potential: -0.174 Folding energies... MFEI: -30.748 AMFE: -0.654 GC content %: 47.012 |
Gene models
Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).
