Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_4AL_A5F678F4C Traes_4AL_A5F678F4C |
ta_iwgsc_4al_v2_2600425 | 15 | 2088 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_4AL_A5F678F4C.1 Traes_4AL_A5F678F4C.1 PAC:31818514 |
High | No | 979 | Get ORF Coding potential... Type: noncoding Potential: -0.853 Folding energies... MFEI: -33.473 AMFE: -0.633 GC content %: 52.911 | |
Taestivum_Traes_4AL_A5F678F4C.2 Traes_4AL_A5F678F4C.2 PAC:31818512 |
High | No | 264 | Get ORF Coding potential... Type: noncoding Potential: -0.974 Folding energies... MFEI: -31.439 AMFE: -0.561 GC content %: 56.061 | |
Taestivum_Traes_4AL_A5F678F4C.3 Traes_4AL_A5F678F4C.3 PAC:31818513 |
High | No | 607 | Get ORF Coding potential... Type: noncoding Potential: -0.733 Folding energies... MFEI: -37.957 AMFE: -0.640 GC content %: 59.308 | |
Taestivum_Traes_4AL_A5F678F4C.4 Traes_4AL_A5F678F4C.4 PAC:31818515 |
High | No | 252 | Get ORF Coding potential... Type: noncoding Potential: -0.963 Folding energies... MFEI: -31.944 AMFE: -0.555 GC content %: 57.540 |