Gene

Taestivum Traes 4BL 5B565FA50

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Taestivum_Traes_4BL_5B565FA50
Traes_4BL_5B565FA50
ta_iwgsc_4bl_v1_7038740 9836 10814 Phytozome v2.2 Triticum_aestivum
Coding?
Yes


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Taestivum_Traes_4BL_5B565FA50.4
Traes_4BL_5B565FA50.4
PAC:31789871
High No 391
Coding potential...
Type: noncoding Potential: -0.671
Folding energies...
MFEI: -45.013 AMFE: -0.690
GC content
%: 65.217


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

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