Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_4BL_959B6F509 Traes_4BL_959B6F509 |
ta_iwgsc_4bl_v1_6975990 | 283 | 2822 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_4BL_959B6F509.1 Traes_4BL_959B6F509.1 PAC:31746209 |
High | No | 1017 | Get ORF Coding potential... Type: noncoding Potential: -0.137 Folding energies... MFEI: -33.815 AMFE: -0.593 GC content %: 57.030 | |
Taestivum_Traes_4BL_959B6F509.2 Traes_4BL_959B6F509.2 PAC:31746210 |
High | No | 351 | Get ORF Coding potential... Type: noncoding Potential: -0.323 Folding energies... MFEI: -37.806 AMFE: -0.572 GC content %: 66.097 | |
Taestivum_Traes_4BL_959B6F509.3 Traes_4BL_959B6F509.3 PAC:31746211 |
High | No | 292 | Get ORF Coding potential... Type: noncoding Potential: -1.266 Folding energies... MFEI: -22.055 AMFE: -0.519 GC content %: 42.466 | |
Taestivum_Traes_4BL_959B6F509.4 Traes_4BL_959B6F509.4 PAC:31746212 |
High | No | 342 | Get ORF Coding potential... Type: noncoding Potential: -1.368 Folding energies... MFEI: -24.912 AMFE: -0.576 GC content %: 43.275 |