Gene

Taestivum Traes 4BS 50A99684E

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Taestivum_Traes_4BS_50A99684E
Traes_4BS_50A99684E
ta_iwgsc_4bs_v1_4867153 337 1800 Phytozome v2.2 Triticum_aestivum
Coding?
Yes


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Taestivum_Traes_4BS_50A99684E.2
Traes_4BS_50A99684E.2
PAC:31790376
Low No 391
Coding potential...
Type: noncoding Potential: -0.852
Folding energies...
MFEI: -44.885 AMFE: -0.667
GC content
%: 67.263


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

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