Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_4BS_B8A9006E2 Traes_4BS_B8A9006E2 |
ta_iwgsc_4bs_v1_4953935 | 7596 | 8344 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_4BS_B8A9006E2.1 Traes_4BS_B8A9006E2.1 PAC:31892081 |
Low | No | 749 | Get ORF Coding potential... Type: noncoding Potential: -1.264 Folding energies... MFEI: -24.272 AMFE: -0.614 GC content %: 39.519 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_4BS_B8A9006E2.1 | RepBase (RepeatMasker) | 2014-01-31 | EnSpm-15_SBi |