Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_4DL_322118257 Traes_4DL_322118257 |
ta_iwgsc_4dl_v3_14442531 | 9097 | 18466 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_4DL_322118257.10 Traes_4DL_322118257.10 PAC:31863576 |
Low | No | 1402 | Get ORF Coding potential... Type: coding Potential: 0.950 Folding energies... MFEI: -28.024 AMFE: -0.618 GC content %: 45.364 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_4DL_322118257.10 | RepBase (RepeatMasker) | 2014-01-31 | Gypsy-141_SBi-I |