Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_4DL_7B6C0CF3C Traes_4DL_7B6C0CF3C |
ta_iwgsc_4dl_v3_14468259 | 4 | 3886 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_4DL_7B6C0CF3C.3 Traes_4DL_7B6C0CF3C.3 PAC:31976884 |
Low | No | 1020 | Get ORF Coding potential... Type: noncoding Potential: -1.072 Folding energies... MFEI: -26.735 AMFE: -0.656 GC content %: 40.784 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_4DL_7B6C0CF3C.3 | RepBase (RepeatMasker) | 2014-01-31 | EnSpm-N1_TA |