Gene

Taestivum Traes 4DL BC6F87E02

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Taestivum_Traes_4DL_BC6F87E02
Traes_4DL_BC6F87E02
ta_iwgsc_4dl_v3_14459255 1769 5090 Phytozome v2.2 Triticum_aestivum
Coding?
Yes


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Taestivum_Traes_4DL_BC6F87E02.3
Traes_4DL_BC6F87E02.3
PAC:31990847
Low No 933
Coding potential...
Type: noncoding Potential: -0.707
Folding energies...
MFEI: -28.542 AMFE: -0.683
GC content
%: 41.801


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

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