Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_4DS_151FB4C44 Traes_4DS_151FB4C44 |
ta_iwgsc_4ds_v1_2289805 | 3689 | 8601 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_4DS_151FB4C44.12 Traes_4DS_151FB4C44.12 PAC:31835526 |
High | No | 760 | Get ORF Coding potential... Type: noncoding Potential: -1.074 Folding energies... MFEI: -22.855 AMFE: -0.601 GC content %: 38.026 | |
Taestivum_Traes_4DS_151FB4C44.13 Traes_4DS_151FB4C44.13 PAC:31835525 |
High | No | 466 | Get ORF Coding potential... Type: noncoding Potential: -1.147 Folding energies... MFEI: -23.305 AMFE: -0.433 GC content %: 53.863 |