Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_4DS_732407927 Traes_4DS_732407927 |
ta_iwgsc_4ds_v1_2279863 | 3285 | 11022 | Phytozome | v2.2 | Triticum_aestivum | Coding? Yes |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_4DS_732407927.6 Traes_4DS_732407927.6 PAC:31864623 |
Low | No | 694 | Get ORF Coding potential... Type: noncoding Potential: -0.590 Folding energies... MFEI: -27.637 AMFE: -0.615 GC content %: 44.957 | |
Taestivum_Traes_4DS_732407927.7 Traes_4DS_732407927.7 PAC:31864624 |
High | No | 682 | Get ORF Coding potential... Type: noncoding Potential: -1.073 Folding energies... MFEI: -24.047 AMFE: -0.661 GC content %: 36.364 |