Gene

Taestivum Traes 5AL 36F36ACBE

From GreeNC


Gene information
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This table contains information about coordinates, assembly and annotation regarding the lncRNA-transcribing gene. In details, it shows whether this this gene transcribes any protein-coding transcript.

Gene alias / name Chrom. Start End Source Assembly Species Details

Taestivum_Traes_5AL_36F36ACBE
Traes_5AL_36F36ACBE
ta_iwgsc_5al_v1_2793889 4076 6983 Phytozome v2.2 Triticum_aestivum
Coding?
No


Transcript features
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This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.

Transcript alias / name Confidence Pre-miRNA Length Sequence Details

Taestivum_Traes_5AL_36F36ACBE.1
Traes_5AL_36F36ACBE.1
PAC:31796457
High No 391
Coding potential...
Type: noncoding Potential: -0.566
Folding energies...
MFEI: -27.852 AMFE: -0.595
GC content
%: 46.803


Gene models
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Transcripts can be colored as magenta (coding transcripts), green (high confidence lncRNAs), cyan (low confidence lncRNAs), or salmon (other ncRNAs).

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