Gene alias / name | Chrom. | Start | End | Source | Assembly | Species | Details
|
---|---|---|---|---|---|---|---|
Taestivum_Traes_5AL_6FE64C542 Traes_5AL_6FE64C542 |
ta_iwgsc_5al_v1_2743790 | 3 | 218 | Phytozome | v2.2 | Triticum_aestivum | Coding? No |
This table shows how a lncRNA has been classified (high/low confidence) or whether it has been classified as pre-miRNA (go to FAQ for classification criteria). Besides, it displays the lncRNA length and sequence as well as information about the ORF, the coding potential calculated by the Coding Potential Calculator (CPC), and the folding energies calculated by RNAfold.
Transcript alias / name | Confidence | Pre-miRNA | Length | Sequence | Details
|
---|---|---|---|---|---|
Taestivum_Traes_5AL_6FE64C542.1 Traes_5AL_6FE64C542.1 PAC:31892228 |
Low | No | 216 | Get ORF Coding potential... Type: noncoding Potential: -0.790 Folding energies... MFEI: -18.241 AMFE: -0.448 GC content %: 40.741 |
Transcript alias | Database | Version | Hit | Evalue |
---|---|---|---|---|
Taestivum_Traes_5AL_6FE64C542.1 | RepBase (RepeatMasker) | 2014-01-31 | MuDR-19_SBi |